Be sure to look at the user guide pages linked here. Skim them to make sure that the topics they cover are represent here (if not add points here as needed). Read enough to ensure that the instructions and explanations are clear, and the page has accurate information and generally appears up-to-date. 

Annotation Track Operators

See Users Guide pages:

• Annotation track operations
• Creating graph tracks from annotations tracks

Functions to test - single track

• Not (single track)
• copy (single track)
• depth (all) (single track)
• depth (start) (single track)
  
• summary (single track)

• Mismatch Graph

• Mismatch Pileup Graph
  

Functions to test - multi track

• intersect
• union
• not

• xor

Graph Track Operators

See Users Guide pages:

• Graph operations and joining and spliting graphs
• Applying thresholds to graphs

Functions to test - single track

• add 
• copy 
• multiply 
• testers choice #1 (choose any of the other available functions to test) 

Functions to test - multi track

• sum
• min
• testers choice #2 (choose any of the other available functions to test) 

thresholding

• Follow the directions in the guide using some test file - does the output look as expected

joining

• join two graphs
• split the joined graphs

Users Guide

• Reviewed the users guide pages. Each page has accurate information and generally appears up-to-date.