General Function Checklist

Loading Default Tracks

• Mac
• Linux
• Windows
  
  • Open Arabidopsis Thaliana and go to gene Chr1:415,078-418,010.
  • Ensure that x and y zoomers are completely zoomed out.
  • Ensure that the tracks consume all of the available vertical space

Zoom, Drag, and Selection Operations

• Mac
• Linux
• Windows
  
  

• Zoom in by click and dragging across the coordinates.  Note that the screenshot is missing the mouse cursor.  The blue highlighted area represents the area created by dragging the cursor.

• Adjust the zoom such that multiple gene models are in view

• Double click on the barb wire region of a gene model.  The view should zoom to fit the selected gene model.

• Zoom back out to view multiple gene models
• Right click on a different gene model.
• Validate that the menu looks as follows

• Select "Zoom to Selected"
• The view should zoom to fit the selected gene model
• Zoom slightly out in both the x and y direction.
• Select the hand "Grab Tool".

• Click and drag anywhere in the track view.

• Validate that the panel scrolls in the direction of the cursor.

• Mac
• Linux
• Windows

• Select the "Selection Tool"

• Go to a group of gene models that are stacked

• Click and drag across the gene models.
  
  
• Validate that all of the gene models are selected.

• Mac
• Linux
• Windows

• Quick search is functioning as expected.

• Mac
• Linux
• Windows
  
  
  

• Select the human genome and type "npas3" into the Quick search box (Quick search should NOT be case sensitive).
• Validate that "NPAS3" is suggested in the Quick search drop-down menu.
• Press enter to navigate to the NPAS3 gene.

Validate that IGB has navigated to the correct gene.

• Zooming on large genes does not cause IGB to freeze when the Annotation Label Field is set to *none*.

• Mac
• Linux
• Windows
  
   Change Label Field in the Annotation tab to *none*.
• Mac
• Linux
• Windows
  
  
  Use the Quick search feature to navigate to the NPAS3 gene.

• Mac
• Linux
• Windows
  
   Use the horizontal zoom slider to zoom into the NPAS3 gene as far as you can possibly zoom. Zoom out completely and then zoom in again.
• Mac
• Linux
• Windows
  
  
  
  Validate that IGB has not frozen.
• Mac
• Linux
• Windows
  
  
  The Current Genome tab is functioning as expected.
• Mac
• Linux
• Windows

• Use the current genome tab to navigate to chromosome 7 of the most recent version of the human genome.
  
• Verify that IGB has navigated to chromosome 7 of the most recent human genome.
  

• The display can be panned using the following objects:
  
  

• Horizontal scroll bar

• • Mac
  • Linux
  • Windows
  
  
  Vertical scroll bar
  • Mac
  • Linux
  • Windows
  
  
  Arrow toolbar shortcuts
  • Mac
  • Linux
  • Windows
  
  
• Auto Scroll

• Mac
• Linux
• Windows
  
  
  
  
  Finally, review the users guide to make sure it is consistent with IGB, images are up-to-date, etc.
• Panning the Display
• Zooming