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- View your RNA-Seq, ChIP-chip or ChIP-seq data alongside publicly-available genome annotations and sequence.
- Visualize and compare multiple genomic annotations data sets from a variety of public and private sources.
- Investigate questions related to alternative splicing, regulation of gene expression, epigenetic modifications of DNA, and many others.
- View results from aligning short-read sequences onto a target genome, identify SNPs, and check alignment quality.
- Copy segments of genomic data for further analysis in other tools, such as primer design tools.
- Create high-quality images for publication in a variety of formats, including PDF, PNG, and more.
If you use IGB in your research, please cite this article:Nicol JW, Helt GA, Blanchard SG Jr, Raja A, Loraine AE. The Integrated Genome
Browser: free software for distribution and exploration of genome-scale datasets.
Bioinformatics. 2009 Oct 15;25(20):2730-1. Epub 2009 Aug 4. PubMed PMID:
19654113; PubMed Central PMCID: PMC2759552.
Article
The Integrated Genome Browser: free software for distribution and exploration of genome-scale datasets, by Nicol, et al.
Bioinformatics. 2009 October 15; 25(20): 2730--2731.
PubMed
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2759552/?tool=pubmed
IGB unique features and benefits
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