Page History

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• • Observation:  The table lists several Quickload sites. (They may be different from those shown below.) If any are shown with a red background, that means that there is a problem with the site - IGB can't reach it. This is a bug and should be reported.

•  Ensure that the edit button in the Data Sources window opens a new window and allows a user to modify an app repository URL or to choose a local folder.

•  Confirm that clicking on a [i] icon in the rightmost 'information' column of the Data Sources window above opens a window with fields and values similar to the example below:
  
  
  
•  Confirm the following species / genome versions are available 
  • Arabidopsis thaliana / A_thaliana_Jun2009
    • Observation: Available Data Tree appears with several sites. (They may be different from those shown below.)
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  • Homo Sapiens/ H_sapiens_Dec_2013
    • Available data should list some data sets. (They may vary from those shown below.)
      
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    •  Important: Confirm that for the human genome assembly, the Cytobands track is visible
      • 

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•  Load a few tracks from the UCSC DAS data source. Note: The UCSC DAS data source is not activated by default - you need to activate it in the Data Sources tab of the Preference window. Once this data source is active, it should be visible on Human/Mouse species.

• Adding/Removing/Editing DataProviders
  •  Add a quickload data provider and confirm it is working as expected
    • Go to the Arabidopsis thaliana/A_thaliana_Jun_2009 genome version
    • Navigate to the File->Preferences->Data Sources tab
    • Click the "Add..." button
    • Enter in a valid quickload url (e.g. http://www.igbquickload.org/abiotic)
    • Enter a name for this quickload site and click the "Submit" button
    • Observations:
      • The quickload site shows up in the "Available Data" tree
      • The data sets listed in the tree can be loaded 
    •  Confirm restarting IGB does not cause the newly added site to be forgotten
  •  Ensure that the edit button in the Data Sources window opens a new window and allows a user to modify an app repository URL or to choose a local folder.
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     Ensure that data sources can be deleted using the Remove button in the Data Sources window

  •  Add a few "Secured" quickload sites and confirm they are working as expected
    • Following the same steps listed above in the previous step, add the following two sites
      • http://igbquickload.org/secureQuickloadTestSites/secureSiteTest
        • username/password 
          • guest/guest
      • http://igbquickload.org/secureQuickloadTestSites/secureSiteTest2
        • username/password
          • guest2/guest2
    • Navigate to the Arabidopsis thaliana Jun_2009 genome version
      • Confirm the two sites are listed the "Available Data" tree and data can be loaded from each site
    •  Confirm you were not prompted for a password for any site more than a single time per session
    •  Confirm restarting IGB does not cause the newly added sites to be forgotten
    •  Confirm that if you checked the "Save Password" option you are not prompted for your password again on restarting IGB

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