Page tree

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

Table of Contents

Introduction

Use this tab to view the currently visible region in the Ensembl or UCSC Genome Browsers.

...

  • See an alternative view on the same data
  • Find out what tracks are worth importing tracks to download and import into the IGB environment

Both Ensembl and UCSC Genome Bioinformatics sites are accessible via DAS1 data sources in IGB. And the UCSC Genome site has a Table Browser that allows you to download Genome Browser data tracks in formats IGB supports.

...

External View showing TP53 in IGB and the UCSC Ensembl Genome Browser
Image RemovedImage Added

Import UCSC

...

genome browser settings

If you have used a web browser to access the UCSC server and have changed the UCSC view through the browser, you can import those settings into IGB, permitting IGB to display the view in the same way as the web browser. Click the settings button (blue box in previous image) and follow the directions in the window.

...