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IGB has a file called species.txt that contains the species name, the common name and any other synonym for that species in a tab delimited format. These are the species that IGB will recognize if you create a new genome, even if the species does not appear in the Data Access > Choose:(species) drop down menu. If there is a species you would like added, please let us know on the
Ailuropoda melanoleuca melanoleuca Giant panda
Anolis carolinensis carolinensis Anole Lizard
Anopheles gambiae gambiae Mosquito
Apis mellifera mellifera European honey bee
Aplysia californica californica California sea hare
Arabidopsis lyrata Lyrate rockcress
Arabidopsis thaliana thaliana Thale cress
Arbacia punctulata punctulata Purple-spined sea urchin
Bos taurus taurus Cow
Brachypodium distachyon distachyon Purple false brome
Branchiostoma floridae floridae Lancet
Brassica rapa rapa Field mustard
Caenorhabditis brenneri brenneri C. brenneri (nematode)
Caenorhabditis briggsae briggsae C. briggsae (nematode)
Caenorhabditis elegans elegans C. elegans (nematode)
Caenorhabditis japonica japonica C. japonica (nematode)
Caenorhabditis remanei remanei C. remanei (nematode)
Callithrix jacchus jacchus Common marmoset
Canis lupus familiaris familiaris Dog
Carica papaya papaya Papaya
Cavia porcellus porcellus Guinea pig
Chlamydomanas reinhardtii reinhardtii motile single-celled green alga
Choloepus hoffmanni hoffmanni Two-toed sloth
Ciona intestinalis intestinalis vase tunicate (sea squirt)
Ciona savignyi savignyi Pacific sea squirt
Cucumis sativus Cucumber
Danio rerio rerio Zebrafish
Dasypus novemcinctus novemcinctus Nine-banded armadillo
Dictyostelium discoideum discoideum sequenced slice mold strain
Drosophila ananassae ananassae D. ananassae (fruit fly)
Drosophila erecta erecta D. erecta (fruit fly)
Drosophila grimshawi grimshawi D. grimshawi (fruit fly)
Drosophila melanogaster melanogaster Common fruit fly
Drosophila mojavensis mojavensis D. mojavensis (fruit fly)
Drosophila persimilis persimilis D. persimilis (fruit fly)
Drosophila pseudoobscura pseudoobscura D. pseudoobscura (fruit fly)
Drosophila sechellia sechellia D. sechelia (fruit fly)
Drosophila simulans simulans D. simulans (fruit fly)
Drosophila virilis virilis D. virilis (fruit fly)
Drosophila yakuba yakuba D. yakuba (fruit fly)
Dipodomys ordii ordii Kangaroo rat
Echinops telfairi telfairi Lesser hedgehog tenrec
Equus caballus caballus Horse
Erinaceus europaeus europaeus European hedgehog
Escherichia coli coli E. coli
Euprymna scolopes scolopes Hawaiian bobtail squid
Felis catus catus House Cat
Gallus gallus gallus Chicken
Gasterosteus aculeatus aculeatus Stickleback
Glycine max max Soybean
Gorilla gorilla gorilla Western gorilla
Gossypium hirsutum hirsutum Upland cotton
Homo sapiens sapiens Human
Hordeum vulgare vulgare Barley
Lemna gibba gibba Gibbous duckweed
Loligo pealeii pealeii longfin inshore squid
Loxodonta africana africana African bush elephant
Lotusjaponicus Lotusjaponicus a model legume
Macaca mulatta mulatta Rhesus monkey
Macropus eugenii eugenii Tammar wallaby
Manihot esculenta esculenta Cassava
Medicago truncatula truncatula Barrel medic
Meleagris gallopavo gallopavo Turkey
Microcebus murinus murinus Gray mouse lemur
Mimulus guttatus guttatus Monkey flower
Monodelphis domestica domestica Opossum
Mus musculus musculus House mouse
Mycobacterium abscessus abscessus M. abcessus
Mycobacterium smegmatis smegmatis M. smegmatis
Mycobacterium tuberculosis tuberculosis M. tuberculosis
Myotis lucifugus lucifugus Little brown bat
Nicotiana tabacum tabacum Tobacco
Ochotona princeps princeps American pika
Ornithorhynchus anatinus anatinus Platypus
Oryctolagus cuniculus cuniculus European rabbit
Oryza sativa sativa Rice
Oryzias latipes latipes Medaka
Otolemur garnettii Nothern garnettii Northern greater galago
Ostreococcus lucimarinus lucimarinus O. lucimarinus
Pan troglodytes troglodytes Chimp
Petromyzon marinus Lamprey
Physcomitrella patens patens Bryophyta
Pinus taeda Loblolly Pine
Plasmodium falciparum falciparum P. falciparum
Pongo pygmaeus abelii abelii Orangutan
Populus trichocarpa trichocarpa Black cottonwood
Pristionchus pacificus pacificus P. pacificus (nematode)
Procavia capensis capensis Rock hyrax
Pseudomonas aeruginosa aeruginosa P_aeruginosa
Pteropus vampyrus vampyrus Large flying fox
Rattus norvegicus norvegicus Rat
Ricinis communis communis Castor oil plant
Saccharomyces cerevisiae cerevisiae Yeast
Schizosaccharomyces pombe pombe Fission yeast
Selaginella moellendorffii Spikemoss
Setaria italica Foxtail millet
Sigmodon hispidus hispidus Cotton rat
Sodalis glossinidius glossinidius S. glossinidius
Solanum lycopersicum lycopersicum Tomato
Sorex araneus araneus Eurasian shrew
Sorghum bicolor bicolor Sorghum
Spermophilus tridecemlineatus tridecemlineatus Thirteen-lined ground squirrel
Strongylocentrotus purpuratus purpuratus Purple sea urchin
Sus scrofa scrofa Wild boar
Taeniopygia guttata guttata Zebra finch
Takifugu rubripes rubripes Fugu
Tarsius syrichta syrichta Philippine tarsier
Tetraodon nigroviridis nigroviridis Tetraodon
Tribolium castaneum castaneum Red flour beetle
Triticum aestivum Common wheat
Tupaia belangeri Northern tree shrew
Tursiops truncatus truncatus Bottlenose dolphin
Vicugna pacos pacos Alpaca
Vitis vinifera vinifera Common grape vine
Volvox carteri Volvox
Xenopus laevis laevis African clawed frog
Xenopus tropicalis tropicalis Pipid frog
Yersinia pestis Bubonic plague pathogen
Yersinia pseudotuberculosis Y. pseudotuberculosis
Zea mays mays Maize