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General Function Checklist


Open a file from BioViz Connect 

Notes:

  • If you do not have a CyVerse account, sign up for a free account at https://user.cyverse.org/register
  • Note: BioViz Connect should support the following browsers: Chrome, Firefox, Edge. BioViz Connect does not support Safari.


  1. In a new web browser, go to https://www.bioviz.org/connect.html
  2. Log in with your Cyverse account.
  3. Navigate to Community > BioViz > rnaseq > A_thaliana_Jun_2009 > SRP220157 > reads
  4. Find SRR10060893.bam and click View in IGB.


  • The A_thaliana_Jun_2009 genome automatically opens in IGB.
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  •  The SRR10060893 - Watered control file is added as a new track.
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  • The SRR10060893 - Watered control foreground (FG) color is blue (check the Data Management Table).
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  1. Navigate to Chr1:2,257,393-2,260,187
  2. Click Load Data.
  • The data load for SRR10060893 - Watered control.

Example image showing data loaded from BioViz Connect in IGB

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  • There are no warnings or errors in the Log.
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