Add the smoke test Data Provider to IGB using the following URL: https://quickload-testing.s3.amazonaws.com/smokeTestingQuickload/
Ensure that loading data looks like this (stack height set at 10, reads may be organized randomly):
Validate that the 'Configure soft-clip' submenu of the bam track right-click menu has 'Show as default color' selected.
Right-click on the bam track and select:
Configure soft-clip -> Show as custom color
A color picker should appear. Select a color (the example below selected red).
Ensure your view is as below, with the color you chose correctly applied:
Right-click on the bam track and select:
Configure soft-clip -> Show as bases
Ensure your view is as below:
Right-click on the bam track and select:
Configure soft-clip -> Hide softclipping
Ensure your view is as below:
To test track operations are working correctly for soft-clipped data, right-click on the bam track and select:
Ensure your view is as below:
