IGB Developer's Guide
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View Modes

under construction

IGB will have the ability to display features using different methods called View Modes.
Each View Mode will only be appropriate to certain feature types. (@ indicates an existing mode)

Annotations/Alignments
  • MaxExpanded @
  • Collapsed @
  • ScrollExpanded - like MaxExpanded, but with a vertical scroll, and no max stack depth
  • Depth @
Alignments
  • Mismatch @
  • Mismatch Pileup @
Graphs
  • Bar @
  • Line @
  • Dot @
  • Min/Max/Avg @
  • Heat Map @
  • StairStep @
  • Histogram
  • these can be combined with the graph collapse/expand option
Operations

View Modes can be the result of an operation or series of operations on the SeqSymmetry data
e.g the not annotation operation, or the log graph operation. The view mode is on the output
SeqSymmetry of the operation.

View Modes can be varying, depending on the view state, for example for a zoomed out annotation,
the depth view mode is shown, but when zoomed in, the MaxExpanded annotation view mode is shown.

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