Search

Complete the following  general function checklist to verify that the Search subsystem is operating as expected.

1. Select the Homo sapien genome and type "dmd" in the Quick-search box.
   • Verify that "DMD" is one of the suggested matches in the Quick-search drop-down.
     
     
     
2. Select "DMD" from the Quick-search drop-down to navigate to the longest known gene in the human genome, the dystrophin gene (DMD).
   • Verify that IGB has navigated to the proper gene (dystrophin) by viewing the selection info for the gene. The gene's title should be "DMD".
     
     
     
3. Select the Advanced Search tab.
   • Verify that search results for "DMD" are already being displayed in the tab.
     
     
     
4. Select the top search result in the Advanced Search tab (ID: "NM_001166237", Title: "GSDMD").
   • Verify that IGB has navigated to "NM_001166237" in the gene "GSDMD".
     
     
     
5. Enter "chr1:30,688,740-31,361,080" into the Quick search box to navigate to the specified coordinates.
   • Verify that IGB has navigated to the proper location.
     
     
     
6. In the Advanced Search tab, select Residues from the search type drop-down menu.
   • Enter "TAG|TAA|TGA" into the Advanced Search textbox and start the search.
     • Verify that the search has located matches for "TAG", "TAA", and "TGA".
       
       
       
     • Verify that residues have been highlighted on the sequence axis (may need to zoom way in).
       
   • Test regular expressions.

User Guide

• Verify that the relevant page in the Users Guide (Advanced Search) appears accurate and up-to-date.

• The general function checklist for the Search subsystem has been completed.