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  • All job statuses are completed with a status of Finished.
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  • Clicking on the result cell opens the result xml on the InterProScan website.
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  1. Select the Properties tab.
  2. In the display window, select a gene model to open the Properties tab.

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  • Exons have the correct protein sequences.
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  •  linux
  •  windows



  1. In the display window, select a protein annotation to open the Properties tab.
  2. The following properties should be present and correct:

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  • Application and library name
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  • Functional URL link
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  • Start, end, and length coordinates
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  1. Run the InterProScan again by selecting Run InterProScan under the InterProScan tab.
  2. Once the jobs are running, select Cancel All Jobs under the InterProScan tab.

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  • Job statuses are Cancelled, and there are no exceptions in the Log.
  •  mac
  •  linux
  •  windows



  1. Select ProtAnnot in the top left of the ProtAnnot window, and then choose Save Image...
  2. Save the image to your machine, then open the file.
  • The image is viewable and saved appropriately.
  •  mac
  •  linux
  •  windows