General Function Checklist

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Validating Track Preference Changes

1. Open the A_thaliana_Jun_2009 genome.
2. Navigate to the following coordinates: Chr1:635,037-637,360
3. Right click on the track label and select Optimize Stack Height.
4. Right click on the white space within a track.
5. Select

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1. Customize...

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• This action

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• opened the Track Preferences tab with the selected track highlighted.

•  Windows - This action should open the Track Preferences tab with the selected track highlighted.
•  Linux - This action should open the Track Preferences tab with the selected track highlighted.

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• Change the Track Name and select apply.

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•  Mac - Validate that the mac
•  linux
•  windows

Change the Track Name to Test Name, then select Apply.

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• The track names were updated.

•  Windows - Validate that the track names were updated.
•  Linux - Validate that the track names were updated.

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• mac
•  linux
•  windows

Change the foreground, background, and track label colors

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to match the following image:

• Validate the color changes

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• The main view of IGB is now colored correctly with the three colors you chose.

•  mac
•  linux
•  windows

Change the track label font size to 20.0.

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• The font increased appropriately.

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•  mac
•  linux
•  windows

Uncheck the

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Arrow option in the Show Strand box.

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• The barbed wire disappeared from the intron sections of gene models

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• Select the "+/-" option .

•  mac
•  linux
•  windows

Check the +/- option in the Show Strand box to combine the plus and minus strands.

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• The two strands are now one.

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• Select "Color" option under "Show Strand"

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•  Mac - Validate that the gene models update to the colors indicated
•  Windows - Validate that the gene models update to the colors indicated
•  Linux - Validate that the gene models update to the colors indicated

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• Select "Restore to Default" option

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•  mac
•  linux
•  windows

Check the Color option in the Show Strand box.

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• The gene models updated to the colors indicated.

•  mac
•  linux
•  windows

Click Restore to Default in the Tracks tab in Preferences.

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• All settings changed in the Tracks tab are restored to their original values

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•  Windows - Validate that all settings changed in this section (Track Style Preferences) are restored to their original values.
•  Linux - Validate that all settings changed in this section (Track Style Preferences) are restored to their original values.

• mac
•  linux
•  windows

Adding and Removing Tracks

Right click on the white space surrounding the gene models

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• The context menu looks

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• Select "Delete Track".  

•  Mac - Validate that the track disappears.
•  Windows - Validate that the track disappears.
•  Linux - Validate that the track disappears.

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• Add the track back in the Data Access tab.

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•  Mac - Validate that the track reappears with no data loaded. 
•  Windows - Validate that the track reappears with no data loaded. 
•  Linux - Validate that the track reappears with no data loaded.

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• like the one pictured above.

•  mac
•  linux
•  windows

Select Delete Track.

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• The track disappeared.

•  mac
•  linux
•  windows

Add the TAIR10 mRNA track back in via the Available Data section.

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• The track reappeared with no data loaded. 

•  mac
•  linux
•  windows