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General Function Checklist

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Validating Track Preference Changes

  1. Open the A_thaliana_Jun_2009 genome.
  2. Navigate to the following coordinates: Chr1:635,037-637,360
  3. Right click on the track label and select Optimize Stack Height.
  4. Right click on the white space within a track.
  5. Select

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  1. Customize...

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  • This action

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  • opened the Track Preferences tab with the selected track highlighted.

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Change the Track Name

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to Test Name, then select Apply.

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  • The track names were updated.

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Change the foreground, background, and track label colors

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to match the following image:

  • Validate the color changes

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  • The main view of IGB is now colored correctly with the three colors you chose.
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Change the track label font size to 20.0.

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  • The font increased appropriately.
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Uncheck the

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Arrow option in the Show Strand box.

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  • The barbed wire disappeared from the intron sections of gene models

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  • Select the ".
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Check the +/-

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option in the Show Strand box to combine the plus and minus strands.

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  • The two strands are now one.

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  • Select "Color" option under "Show Strand"

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  •  Validate that the gene models update  mac
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Check the Color option in the Show Strand box.

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  • The gene models updated to the colors indicated

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  • Select "Restore to Default" option

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Click Restore to Default in the Tracks tab in Preferences.

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  • All settings changed in the Tracks tab are restored to their original values

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Adding and Removing Tracks

Right click on the white space surrounding the gene models

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  • The context menu looks

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  • like the one pictured above.
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Select

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Delete Track

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  •  Validate that the track disappears.

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  • The track disappeared.
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Add the TAIR10 mRNA track back in

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via the Available Data section.

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  • The track reappeared with no data loaded. 
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