General Function Checklist

•  Track Style Preferences

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Validating Track Preference Changes

1. Open the A_thaliana_Jun_2009 genome.
2. Navigate to the following coordinates: Chr1:635,037-637,360
3. Right click on the track label and select Optimize Stack Height.
4. Right click on the white space within a track.
5. Select

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1. Customize...

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• This action should open opened the Track Preferences tab with the selected track highlighted.

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•  linux
•  windows

Change the Track Name

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to Test Name, then select Apply.

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• The track names were updated.

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Change the foreground, background, and track label colors

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to match the following image:

• Validate the color changes

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• The main view of IGB is now colored correctly with the three colors you chose.

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•  linux
•  windows

Change the track label font size to 20.0.

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• Validate that the The font increased appropriately.

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•  linux
•  windows

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Uncheck the

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Arrow option in the Show Strand box.

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• The barbed wire disappeared from the intron sections of gene models

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• Select the ".

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Check the +/-

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option in the Show Strand box to combine the plus and minus strands.

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• The two strands are now one.

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• Select "Color" option under "Show Strand"

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Check the Color option in the Show Strand box.

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• The gene models updated to the colors indicated

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• Select "Restore to Default" option

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• Validate that all settings changed in this section (Track Style Preferences) .

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•  windows

Click Restore to Default in the Tracks tab in Preferences.

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• All settings changed in the Tracks tab are restored to their original values.

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Adding and Removing Tracks

Right click on the white space surrounding the gene models

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• The context menu looks as follows

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• like the one pictured above.

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Select

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Delete Track

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• The track disappeared.

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Add the TAIR10 mRNA track back in

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via the Available Data section.

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• The track will reappear reappeared with no data loaded.  Select the Load Data button to reload the data.

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• linux
•  windows