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The following describes how to add a new genome version to the IGB QuickLoad repository and update IGB species.txt.
Command-line utilities you'll need
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- faToTwoBit from UCSC (needed if there is no 2Bit file available)
- twoBitInfo from UCSC (needed to generate the genome.txt file)
- UNIX wget (not installed by default on Mac but available on most other UNIX systems)
- UNIX sort (should be pre-installed on any UNIX system, including Mac)
- IGBQuickLoad scripts in genomes/pub/src subversion repo.
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