Page tree

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

This track will be given a default label containing all of the relevant parameters, which you can later change if desired. An example name is

  • Wiki Markup
    threshold, \[60 to infinity\] offsets: (+12, \+13), max_gap=20, min_run=30, graph: depth: HotI2T1

The name of the new track will always start with 'threshold' and end with the name of the graph track that was used (in this case, the graph was a depth graph made from a .bam track called HotI2T1). The value '60 to infinity' shows that the threshold level was set to 60 and looked at > thresh. The offsets were NOT corrected as they should have been, and are set to the tiling array values. Finally, the max gap and min run values are recorded.