General Function Checklist
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Open a file from BioViz Connect
Note: If you do not have a CyVerse account, sign up for a free account at https://user.cyverse.org/register
Note: BioViz Connect should support the following browsers: Chrome, Firefox, Edge. BioViz Connect does not support Safari.
- Make sure that IGB is running.
In a web browser:
- Go to https://www.bioviz.org/connect.html
- Log in with your Cyverse account.
- Navigate to Community > BioViz > rnaseq > A_thaliana_Jun_2009 > SRP220157 > reads
- Find SRR10060893.bam and click the View in IGB button.
In IGB:
- The A_thaliana_Jun_2009 genome should automatically open in IGB.
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- The SRR10060893 - Watered control file should be added as a new track.
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- The SRR10060893 - Watered control foreground (FG) color should be blue (check the Data Management Table).
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- Navigate to Chr1:2,257,393-2,260,187
- Click Load Data
- The data should load for SRR10060893 - Watered control.
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- There should be no warnings or errors in the IGB Log.
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