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- In IntelliJ, select FIle > Open then select your local Integrated Genome Browser project.
- In IntelliJ, select FIle > Project Structure...
- In the Project Structure window, under the Project section, set the SDK to a JDK 21 version that includes Java FX.
- Note: As of 2024, we use Azul Zulu 21.0.2 JDK FX.
- In the Project Structure window, under the Project section, set the SDK to a JDK 21 version that includes Java FX.
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- In IntelliJ, select Run > Edit Configurations...
- Add a new configuration by clicking on the + (plus) icon and selecting JAR Application.
- In the configuration tab:
- Set the Path to JAR to the location of the igb_exe.jar in the Integrated Genome Browser project.
- Note: The igb_exe.jar will be generated after first building the project. To build the project in a terminal, install maven, navigate to the IGB project, and then run: mvn clean install
- Set the JRE to the same Azul Zulu 21 JDK FX version used above.
- For the VM options field, add the JAVA_OPTS present in the run_igb.sh/run_igb.bat file (remove the back slashes) or the content below (this is the same content as in the file but modified as described).
- Set the Path to JAR to the location of the igb_exe.jar in the Integrated Genome Browser project.
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