IGB Release Documentation
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changes.mady.by.user Mason Meyer

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  1. Verify that all commonly used file formats are properly supported in IGB by loading all files available on the Smoke Testing Quickload.
    • Add a Data Provider to IGB using the following URL: http://igbquickload.org/smokeTestingQuickload/
      •  The added Quickload site is available for the Homo sapien genome under the Available Data pane.

      • Verify that all files in the Quickload site are loading into IGB:
        • Bam
          •  Bam_HomoSapien.bam
        • Bed
          •  Bed_HomoSapien.bed
          •  Bed_HomoSapien.bed.gz
        • BedGraph
          •  BedGraph_HomoSapien.bedgraph
          •  BedGraph_HomoSapien.bedgraph.gz
        • BigBed
          •  BigBed_HomoSapien.bigbed
        • BigWig
          •  BigWig_HomoSapien,bigwig
        • GFF3
          •  GFF3_HomoSapien.gff3
          •  GFF3_HomoSapien.gff3.gz
        • GTF
          •  GTF_HomoSapien.gtf
          •  GTF_HomoSapien.gtf.gz
        • NarrowAndBroadPeak
          •  BroadPeak_HomoSapien.broadpeak
          •  BroadPeak_HomoSapien.broadpeak.gz
          •  NarrowPeak_HomoSapien.narrowpeak
          •  NarrowPeak_HomoSapien.narrowpeak.gz
        • Wig
          •  Wig_HomoSapien.wig
          •  Wig_HomoSapien.wig.gz