Page tree

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.
Comment: Updated the formatting to be consistent with other smoke testing pages.

General Function Checklist

All steps successfully completed in:

  •  mac
  •  linux
  •  windows

...


Open a file from eFP-Seq Browser

...

  1. In a new web browser

...

  1. Go to , go to https://bar.utoronto.ca/efp-seq_browser/
  2. Paste the following ID in the "Enter a gene name or AGI ID" field: AT1G07350
  3. Click LOAD DATA and wait for the data to load in the main panel.
  4. At the top of the main panel, filter the results by pasting the following text into the Title Filter and hitting enter: Aerial part of 4-week-old plant
  5. Click on the blue link on the right side of the main panel named Alignments in IGB.

In IGB:


  • The A_thaliana_Jun_2009 genome genome automatically opens opened in IGB.
  •  mac
  •  linux
  •  windows
  •  The   The SRR548277 Aerial part of 4-week-old plant file is file was added as a new track.
  •  mac
  •  linux
  •  windows
  • The IGB current coordinates are are Chr1:2,256,883-2,260,687
  •  mac
  •  linux
  •  windows


Click Load Data.

  • The data for SRR548277 Aerial part of 4-week-old plant load automatically.

Image of data loaded from eFP-Seq Browser in IGBImage Added

  •  mac
  •  linux
  •  windows
  • The SRR10060893 - Watered control The SRR548277 Aerial part of 4-week-old plant foreground (FG) color is green (check the Data Management Table).
  •  mac
  •  linux
  •  windows
  • There are no warnings or errors in the IGB Logthe Log.
  •  mac
  •  linux
  •  windows

 

Image of data loaded from eFP-Seq Browser in IGBImage Removed